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raster log file (build_win64)
Mon Jan 04 15:59:01 2021: Building binary for package raster (SVN revision 3420)
using R version 4.0.3 Patched (2021-01-01 r79767) ...
* installing to library 'R:/lib/local/4.0'
* installing *source* package 'raster' ...
** using staged installation
** libs
*** arch - i386
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RasterModule.cpp -o RasterModule.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c aggregate.cpp -o aggregate.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c area.cpp -o area.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bilinear.cpp -o bilinear.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c broom.cpp -o broom.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cellRowCol.cpp -o cellRowCol.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c clamp.cpp -o clamp.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distance.cpp -o distance.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c edge.cpp -o edge.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c focal_fun.cpp -o focal_fun.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c focal_get.cpp -o focal_get.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c focal_sum.cpp -o focal_sum.o
"C:/rtools40/mingw32/bin/"gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c geodesic.c -o geodesic.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getPolygons.cpp -o getPolygons.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c layerize.cpp -o layerize.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c memory.cpp -o memory.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c modal.cpp -o modal.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ppmin.cpp -o ppmin.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c raster_aggregate.cpp -o raster_aggregate.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c raster_distance.cpp -o raster_distance.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rasterize.cpp -o rasterize.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c reclass.cpp -o reclass.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c terrain.cpp -o terrain.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c util.cpp -o util.o
"C:/rtools40/mingw32/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c xyCell.cpp -o xyCell.o
C:/rtools40/mingw32/bin/g++ -shared -s -static-libgcc -o raster.dll tmp.def RasterModule.o RcppExports.o aggregate.o area.o bilinear.o broom.o cellRowCol.o clamp.o distance.o edge.o focal_fun.o focal_get.o focal_sum.o geodesic.o getPolygons.o layerize.o memory.o modal.o ppmin.o raster_aggregate.o raster_distance.o rasterize.o reclass.o terrain.o util.o xyCell.o -LR:/lib/R/R-patched/bin/i386 -lR
installing to R:/lib/local/4.0/00LOCK-raster/00new/raster/libs/i386
*** arch - x64
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RasterModule.cpp -o RasterModule.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c RcppExports.cpp -o RcppExports.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c aggregate.cpp -o aggregate.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c area.cpp -o area.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c bilinear.cpp -o bilinear.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c broom.cpp -o broom.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c cellRowCol.cpp -o cellRowCol.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c clamp.cpp -o clamp.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c distance.cpp -o distance.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c edge.cpp -o edge.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c focal_fun.cpp -o focal_fun.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c focal_get.cpp -o focal_get.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c focal_sum.cpp -o focal_sum.o
"C:/rtools40/mingw64/bin/"gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -std=gnu99 -mfpmath=sse -msse2 -mstackrealign -c geodesic.c -o geodesic.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c getPolygons.cpp -o getPolygons.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c layerize.cpp -o layerize.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c memory.cpp -o memory.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c modal.cpp -o modal.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ppmin.cpp -o ppmin.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c raster_aggregate.cpp -o raster_aggregate.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c raster_distance.cpp -o raster_distance.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c rasterize.cpp -o rasterize.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c reclass.cpp -o reclass.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c terrain.cpp -o terrain.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c util.cpp -o util.o
"C:/rtools40/mingw64/bin/"g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I'R:/lib/local/4.0/Rcpp/include' -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c xyCell.cpp -o xyCell.o
C:/rtools40/mingw64/bin/g++ -shared -s -static-libgcc -o raster.dll tmp.def RasterModule.o RcppExports.o aggregate.o area.o bilinear.o broom.o cellRowCol.o clamp.o distance.o edge.o focal_fun.o focal_get.o focal_sum.o geodesic.o getPolygons.o layerize.o memory.o modal.o ppmin.o raster_aggregate.o raster_distance.o rasterize.o reclass.o terrain.o util.o xyCell.o -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/4.0/00LOCK-raster/00new/raster/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
in method for 'brick' with signature 'x="kasc"': no definition for class "kasc"
in method for 'brick' with signature 'x="grf"': no definition for class "grf"
in method for 'brick' with signature 'x="SpatRaster"': no definition for class "SpatRaster"
in method for 'coerce' with signature '"STFDF","RasterBrick"': no definition for class "STFDF"
in method for 'coerce' with signature '"STSDF","RasterBrick"': no definition for class "STSDF"
in method for 'coerce' with signature '"asc","RasterLayer"': no definition for class "asc"
in method for 'coerce' with signature '"RasterLayer","asc"': no definition for class "asc"
in method for 'coerce' with signature '"kasc","RasterBrick"': no definition for class "kasc"
in method for 'coerce' with signature '"kasc","RasterStack"': no definition for class "kasc"
in method for 'coerce' with signature '"kde","RasterLayer"': no definition for class "kde"
in method for 'coerce' with signature '"grf","RasterBrick"': no definition for class "grf"
in method for 'coerce' with signature '"grf","RasterLayer"': no definition for class "grf"
Creating a generic function for 'ncol' from package 'base' in package 'raster'
in method for 'extent' with signature 'x="bbox"': no definition for class "bbox"
in method for 'extent' with signature 'x="sf"': no definition for class "sf"
in method for 'extract' with signature 'x="Raster",y="sf"': no definition for class "sf"
in method for 'mask' with signature 'x="Raster",mask="sf"': no definition for class "sf"
in method for 'raster' with signature 'x="sf"': no definition for class "sf"
in method for 'raster' with signature 'x="kasc"': no definition for class "kasc"
in method for 'raster' with signature 'x="asc"': no definition for class "asc"
in method for 'raster' with signature 'x="kde"': no definition for class "kde"
in method for 'raster' with signature 'x="grf"': no definition for class "grf"
in method for 'raster' with signature 'x="SpatRaster"': no definition for class "SpatRaster"
in method for 'rasterize' with signature 'x="sf",y="Raster"': no definition for class "sf"
Creating a generic function for 'rowSums' from package 'base' in package 'raster'
Creating a generic function for 'colSums' from package 'base' in package 'raster'
in method for 'setValues' with signature 'x="RasterLayerSparse"': no definition for class "RasterLayerSparse"
in method for 'spplot' with signature 'obj="SpatRaster"': no definition for class "SpatRaster"
in method for 'spplot' with signature 'obj="SpatVector"': no definition for class "SpatVector"
in method for 'stack' with signature 'x="kasc"': no definition for class "kasc"
in method for 'stack' with signature 'x="SpatRaster"': no definition for class "SpatRaster"
** help
*** installing help indices
converting help for package 'raster'
finding HTML links ... done
Arith-methods html
Compare-methods html
Extent-class html
KML html
Logic-methods html
Math-methods html
NAvalue html
RGB html
Raster-classes html
Rcpp-classes html
Summary-methods html
addLayer html
adjacent html
aggregate html
alignExtent html
animate html
approxNA html
area html
as.character html
as.data.frame html
as.list html
as.logical-methods html
as.matrix html
as.raster html
atan2 html
autocor html
bands html
barplot html
bind html
blockSize html
boundaries html
boxplot html
brick html
buffer html
Rd warning: R:/tmp/RtmpiOBFdL/R.INSTALL267c2e526082/raster/man/buffer.Rd:37: file link 'pointDistance' in package 'raster' does not exist and so has been treated as a topic
calc html
cellFrom html
cellStats html
cellsFromExtent html
clamp html
clearValues html
click html
clump html
cluster html
colortable html
compare html
compareCRS html
contour html
coordinates html
corLocal html
cover html
crop html
crosstab html
cut html
cv html
dataType html
datasource html
density html
dimensions html
direction html
disaggregate html
distance html
Rd warning: R:/tmp/RtmpiOBFdL/R.INSTALL267c2e526082/raster/man/distance.Rd:38: file link 'pointDistance' in package 'raster' does not exist and so has been treated as a topic
distanceFromPoints html
Rd warning: R:/tmp/RtmpiOBFdL/R.INSTALL267c2e526082/raster/man/distanceFromPoints.Rd:36: file link 'pointDistance' in package 'raster' does not exist and so has been treated as a topic
draw html
drawExtent html
erase html
extend html
extension html
extent html
extract html
finding level-2 HTML links ... done
extractIndex html
extremeValues html
factor html
filename html
filledContour html
flip html
flowpath html
focal html
focalWeight html
freq html
gainoffset html
geom html
getData html
getValues html
getValuesBlock html
getValuesFocal html
gridDistance html
hdrFiles html
headtail html
hillShade html
hist html
image html
iniFile html
init html
interpolate html
intersect html
isLonLat html
layerStats html
layerize html
localFun html
mask html
match html
merge html
metadata html
modal html
mosaic html
movingFun html
names html
ncell html
nlayers html
origin html
overlay html
pairs html
persp html
plot html
plotRGB html
pointdistance html
predict html
programming html
projectRaster html
projection html
properties html
quantile html
raster-package html
raster html
rasterFromCells html
rasterFromXYZ html
rasterOptions html
rasterTmpFile html
rasterToContour html
rasterToPoints html
rasterToPolygons html
rasterize html
readAll html
reclassify html
rectify html
replacement html
resample html
resolution html
rotate html
rotated html
round html
roundExtent html
rowFromCell html
rowSums html
sampleInt html
sampleRandom html
sampleRegular html
sampleStratified html
saveStack html
scale html
scalebar html
select html
setExtent html
setMinMax html
setValues html
shapefile html
shift html
slopeAspect html
spEasy html
spplot html
stack html
stackApply html
stackSelect html
strech html
subs html
subset html
summary html
symdif html
terrain html
text html
transpose html
trim html
union html
unique html
unstack html
update html
validCell html
validNames html
weighted.mean html
which html
which.minmax html
writeFormats html
writeRaster html
writeValues html
xyFromCell html
zApply html
zonal html
zoom html
zvalues html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'raster' as raster_3.4-8.zip
* DONE (raster)
Run time: 192.07 seconds.
