R Development Page

BAPC log file (check_x86_64_windows)

* using log directory 'R:/run/building/build_2022-03-23-15-10/RF_PKG_CHECK/PKGS/BAPC.Rcheck'
* using R version 4.1.3 Patched (2022-03-10 r81883)
* using platform: x86_64-w64-mingw32 (64-bit)
* using session charset: ISO8859-1
* using option '--as-cran'
* checking for file 'BAPC/DESCRIPTION' ... OK
* this is package 'BAPC' version '0.0.36'
* checking CRAN incoming feasibility ...Warning: unable to access index for repository http://www.math.ntnu.no/inla/R/testing/src/contrib:
  cannot open URL 'http://www.math.ntnu.no/inla/R/testing/src/contrib/PACKAGES'
 NOTE
Maintainer: 'Andrea Riebler '

New submission

Suggests or Enhances not in mainstream repositories:
  INLA
Availability using Additional_repositories specification:
  INLA   no   ?                                     
  ?       ?   http://www.math.ntnu.no/inla/R/testing
Additional repositories with no packages:
  http://www.math.ntnu.no/inla/R/testing

Found the following (possibly) invalid URLs:
  URL: http://www.r-inla.org (moved to https://www.r-inla.org/)
    From: DESCRIPTION
    Status: 200
    Message: OK

The Title field should be in title case. Current version is:
'Projection of cancer incidence and mortality data using Bayesian APC models fitted with INLA'
In title case that is:
'Projection of Cancer Incidence and Mortality Data using Bayesian APC Models Fitted with INLA'

The Description field contains
  can be obtained from http://www.r-inla.org . We recommend the testing
  repos="http://www.math.ntnu.no/inla/R/testing").
Please enclose URLs in angle brackets (<...>).

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... NOTE
Package suggested but not available for checking: 'INLA'
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking serialization versions ... OK
* checking whether package 'BAPC' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for future file timestamps ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... NOTE
Rd file 'BAPC.Rd':
  \usage lines wider than 90 characters:
       model = list(age = list(model = "rw2", prior="loggamma", param = c(1, 0.00005), initial = 4, scale.model=FALSE),
         period = list(include = TRUE, model = "rw2", prior="loggamma", param = c(1, 0.00005), initial = 4, scale.model=FALSE),
         cohort = list(include = TRUE, model = "rw2", prior="loggamma", param = c(1, 0.00005), initial = 4, scale.model=FALSE),
         overdis = list(include = TRUE, model = "iid", prior="loggamma", param = c(1, 0.005), initial = 4)),

These lines will be truncated in the PDF manual.
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* checking for non-standard things in the check directory ... OK
* checking for detritus in the temp directory ... OK
* DONE

Status: 3 NOTEs
See
  'R:/run/building/build_2022-03-23-15-10/RF_PKG_CHECK/PKGS/BAPC.Rcheck/00check.log'
for details.


Run time: 77.99 seconds.