R Development Page

DeadCanMove log file (check_x86_64_linux)

Tue Mar 28 16:25:29 2017: Checking package DeadCanMove (SVN revision 26) ...
* using log directory ‘/mnt/building/build_2017-03-28-16-24/RF_PKG_CHECK/PKGS/DeadCanMove.Rcheck’
* using R version 3.3.3 Patched (2017-03-15 r72357)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘DeadCanMove/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘DeadCanMove’ version ‘0.5’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘A. Marcia Barbosa ’

New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘DeadCanMove’ can be installed ... [1s/1s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
getBoxplots: no visible global function definition for ‘par’
getBoxplots: no visible global function definition for ‘boxplot’
getBoxplots: no visible global function definition for ‘abline’
plotEventCorrs: no visible global function definition for ‘par’
plotEventCorrs: no visible global function definition for ‘plot’
repl.hs.comp: no visible binding for global variable ‘sd’
repl.hs.comp: no visible global function definition for ‘points’
repl.hs.comp: no visible global function definition for ‘abline’
schemeCorrs: no visible global function definition for ‘cor.test’
Undefined global functions or variables:
  abline boxplot cor.test par plot points sd
Consider adding
  importFrom("graphics", "abline", "boxplot", "par", "plot", "points")
  importFrom("stats", "cor.test", "sd")
to your NAMESPACE file.
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... WARNING
Data codoc mismatches from documentation object 'roadkills':
Variables in data frame 'roadkills'
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        day99 individ segment taxon
  Docs: day1 group individ segment

* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... [4s/4s] OK
* checking PDF version of manual ... OK
* DONE

Status: 1 WARNING, 2 NOTEs
See
  ‘/mnt/building/build_2017-03-28-16-24/RF_PKG_CHECK/PKGS/DeadCanMove.Rcheck/00check.log’
for details.


Run time: 28.39 seconds.