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Funclustering log file (build_win64)
Tue Feb 18 18:17:54 2020: Building binary for package Funclustering (SVN revision 61)
using R version 3.6.2 Patched (2020-01-13 r77668) ...
* installing to library 'R:/lib/local/3.6'
* installing *source* package 'Funclustering' ...
** using staged installation
** libs
*** arch - i386
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/Rcpp/include" -I"R:/lib/local/3.6/RcppEigen/include" -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c Funclustering_init.c -o Funclustering_init.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/Rcpp/include" -I"R:/lib/local/3.6/RcppEigen/include" -I"R:/base/local215/include" -fopenmp -O2 -Wall -mtune=generic -c RfunclustMain.cpp -o RfunclustMain.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/Rcpp/include" -I"R:/lib/local/3.6/RcppEigen/include" -I"R:/base/local215/include" -fopenmp -O2 -Wall -mtune=generic -c mfpca.cpp -o mfpca.o
(cd ./Funclustering/ && /usr/bin/make)
make[1]: Entering directory `/cygdrive/r/tmp/RtmpE1eol3/R.INSTALL102435f85416/Funclustering/src-i386/Funclustering'
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IAlgo/EMAlgo.cpp -c -o src/IAlgo/EMAlgo.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IAlgo/IAlgo.cpp -c -o src/IAlgo/IAlgo.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IModel/IModel.cpp -c -o src/IModel/IModel.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IModel/Model.cpp -c -o src/IModel/Model.o
src/IModel/Model.cpp: In member function 'virtual void Model::functionalPca(int, Eigen::VectorXd)':
src/IModel/Model.cpp:123:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < indexVar.size(); ++i)
^
src/IModel/Model.cpp: In member function 'virtual void Model::mfpca(int, Eigen::VectorXd)':
src/IModel/Model.cpp:232:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < indexVar.size(); ++i)
^
src/IModel/Model.cpp:292:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < indexVar1.size(); ++i)
^
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IStrategy/IStrategy.cpp -c -o src/IStrategy/IStrategy.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IStrategy/SimpleStrategy.cpp -c -o src/IStrategy/SimpleStrategy.o
c:/Rtools/mingw_32/bin/ar -rc libFunclustering.a src/IAlgo/EMAlgo.o src/IAlgo/IAlgo.o src/IModel/IModel.o src/IModel/Model.o src/IStrategy/IStrategy.o src/IStrategy/SimpleStrategy.o
make[1]: Leaving directory `/cygdrive/r/tmp/RtmpE1eol3/R.INSTALL102435f85416/Funclustering/src-i386/Funclustering'
c:/Rtools/mingw_32/bin/ranlib ./Funclustering/libFunclustering.a
C:\Rtools\mingw_32\bin\nm.exe: Warning: 'Funclustering' is not an ordinary file
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o Funclustering.dll tmp.def Funclustering_init.o RfunclustMain.o mfpca.o -fopenmp -L./Funclustering/ -lFunclustering -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/i386 -lR
installing to R:/lib/local/3.6/00LOCK-Funclustering/00new/Funclustering/libs/i386
*** arch - x64
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-patched/include" -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/Rcpp/include" -I"R:/lib/local/3.6/RcppEigen/include" -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c Funclustering_init.c -o Funclustering_init.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/Rcpp/include" -I"R:/lib/local/3.6/RcppEigen/include" -I"R:/base/local215/include" -fopenmp -O2 -Wall -mtune=generic -c RfunclustMain.cpp -o RfunclustMain.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/Rcpp/include" -I"R:/lib/local/3.6/RcppEigen/include" -I"R:/base/local215/include" -fopenmp -O2 -Wall -mtune=generic -c mfpca.cpp -o mfpca.o
(cd ./Funclustering/ && /usr/bin/make)
make[1]: Entering directory `/cygdrive/r/tmp/RtmpE1eol3/R.INSTALL102435f85416/Funclustering/src-x64/Funclustering'
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IAlgo/EMAlgo.cpp -c -o src/IAlgo/EMAlgo.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IAlgo/IAlgo.cpp -c -o src/IAlgo/IAlgo.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IModel/IModel.cpp -c -o src/IModel/IModel.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IModel/Model.cpp -c -o src/IModel/Model.o
src/IModel/Model.cpp: In member function 'virtual void Model::functionalPca(int, Eigen::VectorXd)':
src/IModel/Model.cpp:123:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < indexVar.size(); ++i)
^
src/IModel/Model.cpp: In member function 'virtual void Model::mfpca(int, Eigen::VectorXd)':
src/IModel/Model.cpp:232:21: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < indexVar.size(); ++i)
^
src/IModel/Model.cpp:292:23: warning: comparison between signed and unsigned integer expressions [-Wsign-compare]
for (int i = 0; i < indexVar1.size(); ++i)
^
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IStrategy/IStrategy.cpp -c -o src/IStrategy/IStrategy.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -O2 -Wall -mtune=generic -DNDEBUG -DRPACKAGE -I"R:/lib/local/3.6/RcppEigen/include" src/IStrategy/SimpleStrategy.cpp -c -o src/IStrategy/SimpleStrategy.o
c:/Rtools/mingw_64/bin/ar -rc libFunclustering.a src/IAlgo/EMAlgo.o src/IAlgo/IAlgo.o src/IModel/IModel.o src/IModel/Model.o src/IStrategy/IStrategy.o src/IStrategy/SimpleStrategy.o
make[1]: Leaving directory `/cygdrive/r/tmp/RtmpE1eol3/R.INSTALL102435f85416/Funclustering/src-x64/Funclustering'
c:/Rtools/mingw_64/bin/ranlib ./Funclustering/libFunclustering.a
C:\Rtools\mingw_64\bin\nm.exe: Warning: 'Funclustering' is not an ordinary file
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o Funclustering.dll tmp.def Funclustering_init.o RfunclustMain.o mfpca.o -fopenmp -L./Funclustering/ -lFunclustering -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/3.6/00LOCK-Funclustering/00new/Funclustering/libs/x64
** R
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
converting help for package 'Funclustering'
finding HTML links ... done
Funclustering-package html
funclust html
mfpca html
mfpcaPlot html
plotOC html
plotfd html
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Funclustering' as Funclustering_1.0.3.zip
* DONE (Funclustering)
Run time: 117.21 seconds.