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tssp log file (check_x86_64_linux)

Thu Aug 18 17:07:21 2016: Checking package tssp (SVN revision 8) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/tssp.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘tssp/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘tssp’ version ‘0.1-1’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Bernhard Pfaff ’

New submission

The Description field should not start with the package name,
  'This package' or similar.

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘tssp’ can be installed ... [1s/1s] OK
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Author field differs from that derived from Authors@R
  Author:    ‘Bernhard Pfaff’
  Authors@R: ‘Bernhard Pfaff [aut, cre]’

* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... NOTE
Warning: no function found corresponding to methods exports from ‘tssp’ for: ‘show’

A namespace must be able to be loaded with just the base namespace
loaded: otherwise if the namespace gets loaded by a saved object, the
session will be unable to start.

Probably some imports need to be declared in the NAMESPACE file.
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Packages in Depends field not imported from:
  ‘Rglpk’ ‘methods’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
DEP: no visible global function definition for ‘new’
LPD: no visible global function definition for ‘new’
addCon,CLPD: no visible global function definition for ‘validObject’
addTheta,CLPD: no visible global function definition for ‘validObject’
addVar,CLPD: no visible global function definition for ‘validObject’
getA,CDEPD: no visible global function definition for ‘callNextMethod’
getA,CLPD: no visible global function definition for ‘slot’
getA,CLPS: no visible global function definition for ‘callNextMethod’
getBounds,CDEPD: no visible global function definition for
  ‘callNextMethod’
getBounds,CLPD: no visible global function definition for ‘slot’
getBounds,CLPS: no visible global function definition for
  ‘callNextMethod’
getDep,CDEPS: no visible global function definition for ‘slot’
getDir,CDEPD: no visible global function definition for
  ‘callNextMethod’
getDir,CLPD: no visible global function definition for ‘slot’
getDir,CLPS: no visible global function definition for ‘callNextMethod’
getH,CDEPD: no visible global function definition for ‘slot’
getK,CDEPD: no visible global function definition for ‘slot’
getMP,CDEPD: no visible global function definition for ‘slot’
getMax,CDEPD: no visible global function definition for
  ‘callNextMethod’
getMax,CLPD: no visible global function definition for ‘slot’
getMax,CLPS: no visible global function definition for ‘callNextMethod’
getObj,CDEPD: no visible global function definition for
  ‘callNextMethod’
getObj,CLPD: no visible global function definition for ‘slot’
getObj,CLPS: no visible global function definition for ‘callNextMethod’
getOpt,CDEPS: no visible global function definition for ‘slot’
getOpt,CLPS: no visible global function definition for ‘slot’
getPar,CDEPS: no visible global function definition for ‘slot’
getPar,CLPS: no visible global function definition for ‘slot’
getProb,CDEPD: no visible global function definition for ‘slot’
getProb,CDEPS: no visible global function definition for
  ‘callNextMethod’
getQ,CDEPD: no visible global function definition for ‘slot’
getRhs,CDEPD: no visible global function definition for
  ‘callNextMethod’
getRhs,CLPD: no visible global function definition for ‘slot’
getRhs,CLPS: no visible global function definition for ‘callNextMethod’
getStatus,CDEPS: no visible global function definition for ‘slot’
getStatus,CLPS: no visible global function definition for ‘slot’
getSubLP,CDEPS: no visible global function definition for ‘slot’
getTech,CDEPD: no visible global function definition for ‘slot’
getW,CDEPD: no visible global function definition for ‘slot’
gt2lt,CLPD: no visible global function definition for ‘validObject’
iq2eq,CLPD: no visible global function definition for ‘validObject’
lt2gt,CLPD: no visible global function definition for ‘validObject’
solveDEP,CDEPD: no visible global function definition for ‘new’
solveExpVal,CDEPS: no visible global function definition for
  ‘callNextMethod’
solveLPD,CLPD: no visible global function definition for
  ‘Rglpk_solve_LP’
solveLPD,CLPD: no visible global function definition for ‘new’
Undefined global functions or variables:
  Rglpk_solve_LP callNextMethod new slot validObject
Consider adding
  importFrom("methods", "callNextMethod", "new", "slot", "validObject")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking examples ... [2s/2s] OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
  Running ‘FarmerTed.R’
  Comparing ‘FarmerTed.Rout’ to ‘FarmerTed.Rout.save’ ...1a2,17
> R version 2.15.3 (2013-03-01) -- "Security Blanket"
> Copyright (C) 2013 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: i486-pc-linux-gnu (32-bit)
> 
> R ist freie Software und kommt OHNE JEGLICHE GARANTIE.
> Sie sind eingeladen, es unter bestimmten Bedingungen weiter zu verbreiten.
> Tippen Sie 'license()' or 'licence()' für Details dazu.
> 
> R ist ein Gemeinschaftsprojekt mit vielen Beitragenden.
> Tippen Sie 'contributors()' für mehr Information und 'citation()',
> um zu erfahren, wie R oder R packages in Publikationen zitiert werden können.
> 
> Tippen Sie 'demo()' für einige Demos, 'help()' für on-line Hilfe, oder
> 'help.start()' für eine HTML Browserschnittstelle zur Hilfe.
> Tippen Sie 'q()', um R zu verlassen.
4c20,22
< Using the GLPK callable library version 4.55
---
> Lade nötiges Paket: Rglpk
> Lade nötiges Paket: slam
> Using the GLPK callable library version 4.47
112,115d129
< Warning message:
< In .local(object, ...) : 
< Not converged for 'max.iter'.
< 
  Running ‘FeasCuts.R’
  Comparing ‘FeasCuts.Rout’ to ‘FeasCuts.Rout.save’ ...1a2,19
> R version 2.15.3 (2013-03-01) -- "Security Blanket"
> Copyright (C) 2013 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: i486-pc-linux-gnu (32-bit)
> 
> R ist freie Software und kommt OHNE JEGLICHE GARANTIE.
> Sie sind eingeladen, es unter bestimmten Bedingungen weiter zu verbreiten.
> Tippen Sie 'license()' or 'licence()' für Details dazu.
> 
> R ist ein Gemeinschaftsprojekt mit vielen Beitragenden.
> Tippen Sie 'contributors()' für mehr Information und 'citation()',
> um zu erfahren, wie R oder R packages in Publikationen zitiert werden können.
> 
> Tippen Sie 'demo()' für einige Demos, 'help()' für on-line Hilfe, oder
> 'help.start()' für eine HTML Browserschnittstelle zur Hilfe.
> Tippen Sie 'q()', um R zu verlassen.
> 
> [Vorher gesicherter Workspace wiederhergestellt]
4c22,24
< Using the GLPK callable library version 4.55
---
> Lade nötiges Paket: Rglpk
> Lade nötiges Paket: slam
> Using the GLPK callable library version 4.47
  Running ‘OptCuts.R’
  Comparing ‘OptCuts.Rout’ to ‘OptCuts.Rout.save’ ...1a2,19
> R version 2.15.3 (2013-03-01) -- "Security Blanket"
> Copyright (C) 2013 The R Foundation for Statistical Computing
> ISBN 3-900051-07-0
> Platform: i486-pc-linux-gnu (32-bit)
> 
> R ist freie Software und kommt OHNE JEGLICHE GARANTIE.
> Sie sind eingeladen, es unter bestimmten Bedingungen weiter zu verbreiten.
> Tippen Sie 'license()' or 'licence()' für Details dazu.
> 
> R ist ein Gemeinschaftsprojekt mit vielen Beitragenden.
> Tippen Sie 'contributors()' für mehr Information und 'citation()',
> um zu erfahren, wie R oder R packages in Publikationen zitiert werden können.
> 
> Tippen Sie 'demo()' für einige Demos, 'help()' für on-line Hilfe, oder
> 'help.start()' für eine HTML Browserschnittstelle zur Hilfe.
> Tippen Sie 'q()', um R zu verlassen.
> 
> [Vorher gesicherter Workspace wiederhergestellt]
4c22,24
< Using the GLPK callable library version 4.55
---
> Lade nötiges Paket: Rglpk
> Lade nötiges Paket: slam
> Using the GLPK callable library version 4.47
67,70d86
< Warning message:
< In .local(object, ...) : 
< Not converged for 'max.iter'.
< 
81c97
< Number of restrictions (total): 53 
---
> Number of restrictions (total): 7 
89,134d104
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
< OC:  133.44*x1 + 130.56*x2 + 0*S2 + 0*S3 + 0*S1 + 1*theta >= 0 
 [4s/4s] OK
* checking PDF version of manual ... OK
* DONE

Status: 5 NOTEs
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/tssp.Rcheck/00check.log’
for details.


Run time: 35.84 seconds.