R Development Page
Contributed R Packages
Below is a list of all packages provided by project CALIBER health records research toolkit.
Important note for package
binaries: R-Forge provides these binaries only for
the most recent version of R, but not for older
versions. In order to successfully install the
packages provided on R-Forge, you have to switch
to the most recent version of R or, alternatively,
install from the package sources (.tar.gz).
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CALIBERcodelists | Generate ICD10, Read and OPCS codelists
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Facilitates the generation, documentation and comparision of codelists for identifying diagnoses, procedures, investigations and other events recorded for patients in CALIBER electronic health record data. The CALIBER programme is funded by the Wellcome Trust (086091/Z/08/Z) and the National Institute for Health Research (NIHR) under its Programme Grants for Applied Research programme (RP-PG-0407-10314). The author is supported by a Wellcome Trust Clinical Research Training Fellowship (0938/30/Z/10/Z). |
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Version: 0.2-11 |
Last change: 2020-02-27 16:43:02+01 |
Rev.: 65 |
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Download:
 (.tar.gz) |
 (.zip) |
Build status: Current |
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R install command:
install.packages("CALIBERcodelists", repos="http://R-Forge.R-project.org") |
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CALIBERdatamanage | Data Management Tools for CALIBER Datasets
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Data management tools for CALIBER datasets of electronic health records. The CALIBER programme is funded by the Wellcome Trust (086091/Z/08/Z) and the National Institute for Health Research (NIHR) under its Programme Grants for Applied Research programme (RP-PG-0407-10314). The author is supported by a Wellcome Trust Clinical Research Training Fellowship (0938/30/Z/10/Z). |
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Version: 0.1-15 |
Last change: 2021-11-23 13:18:47+01 |
Rev.: 70 |
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Download:
(.tar.gz) |
(.zip) |
Build status: Current |
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R install command:
install.packages("CALIBERdatamanage", repos="http://R-Forge.R-project.org") |
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CALIBERdrugdose | Extract Drug Dose From Unstructured Dosage Text
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Functions to extract drug dose from text in general practice records, such as in the CALIBER electronic health record database. The CALIBER programme is funded by the Wellcome Trust (086091/Z/08/Z) and the National Institute for Health Research (NIHR) under its Programme Grants for Applied Research programme (RP-PG-0407-10314). The author is supported by a Wellcome Trust Clinical Research Training Fellowship (0938/30/Z/10/Z). |
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Version: 0.1-3 |
Last change: 2021-03-17 12:43:36+01 |
Rev.: 67 |
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Download:
(.tar.gz) |
(.zip) |
Build status: Current |
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R install command:
install.packages("CALIBERdrugdose", repos="http://R-Forge.R-project.org") |
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CALIBERfma | R interface to the Freetext Matching Algorithm
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The Freetext Matching Algorithm is a natural language processing system for clinical text. This R package facilitates the use of the program in R for Linux systems with wine. The CALIBER programme is funded by the Wellcome Trust (086091/Z/08/Z) and the National Institute for Health Research (NIHR) under its Programme Grants for Applied Research programme (RP-PG-0407-10314). The author is supported by a Wellcome Trust Clinical Research Training Fellowship (0938/30/Z/10/Z). |
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Version: 0.1-0 |
Last change: 2014-08-22 17:03:52+02 |
Rev.: 42 |
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Download:
(.tar.gz) |
(.zip) |
Build status: Current |
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R install command:
install.packages("CALIBERfma", repos="http://R-Forge.R-project.org") |
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CALIBERrfimpute | Multiple Imputation Using MICE and Random Forest
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Functions to impute using Random Forest under Full Conditional Specifications (Multivariate Imputation by Chained Equations). |
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Version: 1.0-4 |
Last change: 2021-04-27 17:47:32+02 |
Rev.: 69 |
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Download:
(.tar.gz) |
(.zip) |
Build status: Current | Stable Release: Get CALIBERrfimpute 1.0-7 from CRAN |
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R install command:
install.packages("CALIBERrfimpute", repos="http://R-Forge.R-project.org") |
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Build status codes
0 - Current: the package is available for download. The corresponding package passed checks on the Linux and Windows platform without ERRORs.
1 - Scheduled for build: the package has been recognized by the build system and provided in the staging area.
2 - Building: the package has been sent to the build machines. It will be built and checked using the latest patched version of R. Note that it is included in a batch of several packages. Thus, this process will take some time to finish.
3 - Failed to build: the package failed to build or did not pass the checks on the Linux and/or Windows platform. It is not made available since it does not meet the policies.
4 - Conflicts: two or more packages of the same name exist. None of them will be built. Maintainers are asked to negotiate further actions.
5 - Offline: the package is not available. The build system may be offline or the package maintainer did not trigger a rebuild (done e.g., via committing to the package repository).
If your package is not shown on this page or not building, then check the build system status report.
