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depmix log file (00install.out)
* installing *source* package 'depmix' ...
** using staged installation
** libs
*** arch - i386
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c depmix_init.c -o depmix_init.o
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c derdist.c -o derdist.o
c:/Rtools/mingw_32/bin/gcc -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O3 -Wall -std=gnu99 -mtune=generic -c hessdist.c -o hessdist.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c logl.cc -o logl.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c matrix.cc -o matrix.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mdmm.cc -o mdmm.o
mdmm.cc: In member function 'int mdmm::itemnr(int)':
mdmm.cc:362:6: warning: variable 'prev' set but not used [-Wunused-but-set-variable]
int prev=colnr;
^
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mgdmm.cc -o mgdmm.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mmts.cc -o mmts.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mts.cc -o mts.o
c:/Rtools/mingw_32/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o depmix.dll tmp.def depmix_init.o derdist.o hessdist.o logl.o matrix.o mdmm.o mgdmm.o mmts.o mts.o -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-PATC~1/bin/i386 -lR
installing to R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00LOCK-depmix/00new/depmix/libs/i386
*** arch - x64
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c depmix_init.c -o depmix_init.o
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c derdist.c -o derdist.o
c:/Rtools/mingw_64/bin/gcc -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -std=gnu99 -mtune=generic -c hessdist.c -o hessdist.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c logl.cc -o logl.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c matrix.cc -o matrix.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mdmm.cc -o mdmm.o
mdmm.cc: In member function 'int mdmm::itemnr(int)':
mdmm.cc:362:6: warning: variable 'prev' set but not used [-Wunused-but-set-variable]
int prev=colnr;
^
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mgdmm.cc -o mgdmm.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mmts.cc -o mmts.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG -I"R:/base/local215/include" -O2 -Wall -mtune=generic -c mts.cc -o mts.o
c:/Rtools/mingw_64/bin/g++ -std=gnu++11 -shared -s -static-libgcc -o depmix.dll tmp.def depmix_init.o derdist.o hessdist.o logl.o matrix.o mdmm.o mgdmm.o mmts.o mts.o -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-PATC~1/bin/x64 -lR
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/depmix_init.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/derdist.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/hessdist.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/logl.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/matrix.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mdmm.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mgdmm.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mmts.o: File format not recognized
/usr/bin/nm: R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mts.o: File format not recognized
Warning messages:
1: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/depmix_init.o"' had status 1
2: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/derdist.o"' had status 1
3: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/hessdist.o"' had status 1
4: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/logl.o"' had status 1
5: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/matrix.o"' had status 1
6: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mdmm.o"' had status 1
7: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mgdmm.o"' had status 1
8: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mmts.o"' had status 1
9: In system(sprintf("%s -Pg %s", shQuote(nm), shQuote(f)), intern = TRUE) :
running command '"R:\share\cygwin\bin\nm.exe" -Pg "R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00_pkg_src/depmix/src-x64/mts.o"' had status 1
installing to R:/run/building/build_2020-01-15-16-46/RF_PKG_CHECK/PKGS/depmix.Rcheck/00LOCK-depmix/00new/depmix/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
*** arch - i386
*** arch - x64
** testing if installed package can be loaded from final location
*** arch - i386
*** arch - x64
** testing if installed package keeps a record of temporary installation path
* DONE (depmix)
