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crules log file (check_x86_64_linux)

Thu Aug 18 14:09:14 2016: Checking package crules (SVN revision 31) ...
* using log directory ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/crules.Rcheck’
* using R version 3.3.1 Patched (2016-08-17 r71112)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--as-cran’
* checking for file ‘crules/DESCRIPTION’ ... OK
* this is package ‘crules’ version ‘0.9-2’
* checking CRAN incoming feasibility ... NOTE
Maintainer: ‘Lukasz Wrobel ’

New submission

The Date field is over a month old.
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘crules’ can be installed ... [56s/58s] WARNING
Found the following significant warnings:
  Warning: For function ‘show’, signature ‘crules’: argument in method definition changed from (x) to (object)
See ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/crules.Rcheck/00install.out’ for details.
* checking installed package size ... OK
* checking package directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Malformed Description field: should contain one or more complete sentences.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking use of S3 registration ... OK
* checking dependencies in R code ... NOTE
Package in Depends field not imported from: ‘methods’
  These packages need to be imported from (in the NAMESPACE file)
  for when this namespace is loaded but not attached.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
.prepare.data: no visible global function definition for ‘model.frame’
.prepare.data: no visible binding for global variable ‘na.pass’
.prepare.data: no visible global function definition for ‘runif’
condition: no visible global function definition for ‘new’
conditions: no visible global function definition for ‘new’
crules: no visible global function definition for ‘new’
crules.ams: no visible global function definition for ‘model.frame’
crules.ams: no visible binding for global variable ‘na.pass’
crules.cv: no visible global function definition for ‘new’
knowledge: no visible global function definition for ‘new’
rule: no visible global function definition for ‘new’
predict,crules: no visible global function definition for ‘runif’
predict,crules: no visible global function definition for ‘new’
Undefined global functions or variables:
  model.frame na.pass new runif
Consider adding
  importFrom("methods", "new")
  importFrom("stats", "model.frame", "na.pass", "runif")
to your NAMESPACE file (and ensure that your DESCRIPTION Imports field
contains 'methods').
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd line widths ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
  ‘RInterface’ ‘condition’ ‘conditions’ ‘crules.ams’ ‘crules.cv’
  ‘crules.qGrowSet’ ‘crules.qPruneSet’ ‘knowledge’ ‘rule’
Undocumented S4 classes:
  ‘crules.knowledge’ ‘crules.conditions’ ‘crules.condition’ ‘crules’
  ‘crules.rule’ ‘crules.cv’ ‘Rcpp_RInterface’
Undocumented S4 methods:
  generic 'as.data.frame' and siglist 'crules.cv'
  generic 'c' and siglist 'crules.knowledge'
  generic 'mean' and siglist 'crules.cv'
  generic 'predict' and siglist 'crules'
  generic 'print' and siglist 'crules'
  generic 'summary' and siglist 'crules'
All user-level objects in a package (including S4 classes and methods)
should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking compiled code ... NOTE
File ‘crules/libs/crules.so’:
  Found ‘_ZSt4cout’, possibly from ‘std::cout’ (C++)
    Objects: ‘ElementaryCondition.o’, ‘RInterface.o’
  Found ‘rand’, possibly from ‘rand’ (C)
    Objects: ‘SequentialCovering.o’,
      ‘SequentialCoveringWithPreferences.o’, ‘SetOfExamples.o’
  Found ‘srand’, possibly from ‘srand’ (C)
    Object: ‘RInterface.o’

Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor the system RNG.

See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
* checking examples ... NONE
* checking PDF version of manual ... OK
* checking for code which exercises the package ... WARNING
No examples, no tests, no vignettes
* DONE

Status: 3 WARNINGs, 5 NOTEs
See
  ‘/mnt/building/build_2016-08-18-12-24/RF_PKG_CHECK/PKGS/crules.Rcheck/00check.log’
for details.


Run time: 101.36 seconds.