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Corbi log file (build_win64)
Tue May 3 10:55:21 2022: Building binary for package Corbi (SVN revision 46)
using R version 4.2.0 Patched (2022-05-01 r82294 ucrt) ...
* installing to library 'R:/lib/local/4.2'
* installing *source* package 'Corbi' ...
** using staged installation
** libs
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Corbi.cpp -o Corbi.o
In file included from Corbi.h:5,
from Corbi.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c NetDEG.cpp -o NetDEG.o
In file included from Corbi.h:5,
from NetDEG.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c NetQuery.cpp -o NetQuery.o
In file included from Corbi.h:5,
from NetQuery.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c ProAlign.cpp -o ProAlign.o
In file included from Corbi.h:5,
from ProAlign.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c Subnets.cpp -o Subnets.o
In file included from Corbi.h:5,
from Subnets.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c multihyper.cpp -o multihyper.o
In file included from Corbi.h:5,
from multihyper.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c quantile.cpp -o quantile.o
In file included from Corbi.h:5,
from quantile.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -I"R:/lib/R/R-patched/include" -DNDEBUG -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include" -O2 -Wall -mfpmath=sse -msse2 -mstackrealign -c utils.cpp -o utils.o
In file included from Corbi.h:5,
from utils.cpp:1:
misc.h: In function 'SEXPREC* GetListElement(SEXP, const char*)':
misc.h:82:3: warning: this 'for' clause does not guard... [-Wmisleading-indentation]
82 | for (int i = 0; i < length(list); i++)
| ^~~
misc.h:88:5: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'for'
88 | return value;
| ^~~~~~
g++ -std=gnu++11 -shared -s -static-libgcc -o Corbi.dll tmp.def Corbi.o NetDEG.o NetQuery.o ProAlign.o Subnets.o multihyper.o quantile.o utils.o -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools42/x86_64-w64-mingw32.static.posix/lib -LR:/lib/R/R-patched/bin/x64 -lR
installing to R:/lib/local/4.2/00LOCK-Corbi/00new/Corbi/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Corbi' as Corbi_0.6-2.zip
* DONE (Corbi)
Run time: 10.57 seconds.
