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phylobase log file (build_win64)

Thu May 08 18:30:34 2014: Building binary for package phylobase (SVN revision 951)
using R version 3.1.0 Patched (2014-05-05 r65530) ...


install for i386

* installing to library 'R:/lib/local/3.1'
* installing *source* package 'phylobase' ...
** libs
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c GetNCL.cpp -o GetNCL.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
gcc -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c ancestors.c -o ancestors.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c checkPhylo4.cpp -o checkPhylo4.o
gcc -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c descendants.c -o descendants.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsassumptionsblock.cpp -o nxsassumptionsblock.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsblock.cpp -o nxsblock.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxscharactersblock.cpp -o nxscharactersblock.o
nxscharactersblock.cpp: In static member function 'static NxsCharactersBlock* NxsCharactersBlock::NewCodonsCharactersBlock(const NxsCharactersBlock*, bool, bool, bool, const std::list*, NxsCharactersBlock**)':
nxscharactersblock.cpp:1306:39: warning: variable 'endNucIt' set but not used [-Wunused-but-set-variable]
nxscharactersblock.cpp: In member function 'virtual void NxsCharactersBlock::HandleFormat(NxsToken&)':
nxscharactersblock.cpp:1975:25: warning: variable 'numDefStates' set but not used [-Wunused-but-set-variable]
nxscharactersblock.cpp: In member function 'virtual void NxsCharactersBlock::HandleStdMatrix(NxsToken&)':
nxscharactersblock.cpp:4102:21: warning: variable 'ftContRowPtr' set but not used [-Wunused-but-set-variable]
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxscxxdiscretematrix.cpp -o nxscxxdiscretematrix.o
nxscxxdiscretematrix.cpp: In function 'unsigned int NxsCompressDiscreteMatrix(const NxsCXXDiscreteMatrix&, std::set&, std::vector*, const NxsUnsignedSet*, const NxsUnsignedSet*)':
nxscxxdiscretematrix.cpp:137:7: warning: variable 'weightsSpecified' set but not used [-Wunused-but-set-variable]
nxscxxdiscretematrix.cpp:138:7: warning: variable 'weightsAsInts' set but not used [-Wunused-but-set-variable]
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsdatablock.cpp -o nxsdatablock.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsdistancedatum.cpp -o nxsdistancedatum.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsdistancesblock.cpp -o nxsdistancesblock.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsemptyblock.cpp -o nxsemptyblock.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsexception.cpp -o nxsexception.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsmultiformat.cpp -o nxsmultiformat.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxspublicblocks.cpp -o nxspublicblocks.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsreader.cpp -o nxsreader.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxssetreader.cpp -o nxssetreader.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsstring.cpp -o nxsstring.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxstaxablock.cpp -o nxstaxablock.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxstoken.cpp -o nxstoken.o
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxstreesblock.cpp -o nxstreesblock.o
nxstreesblock.cpp: In member function 'std::vector > NxsSimpleTree::GetIntPathDistances(bool) const':
nxstreesblock.cpp:357:25: warning: variable 'iRow' set but not used [-Wunused-but-set-variable]
nxstreesblock.cpp:358:25: warning: variable 'jRow' set but not used [-Wunused-but-set-variable]
nxstreesblock.cpp: In member function 'std::vector > NxsSimpleTree::GetDblPathDistances(bool) const':
nxstreesblock.cpp:469:25: warning: variable 'iRow' set but not used [-Wunused-but-set-variable]
nxstreesblock.cpp:470:25: warning: variable 'jRow' set but not used [-Wunused-but-set-variable]
g++ -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsunalignedblock.cpp -o nxsunalignedblock.o
nxsunalignedblock.cpp: In member function 'virtual void NxsUnalignedBlock::HandleFormat(NxsToken&)':
nxsunalignedblock.cpp:330:25: warning: variable 'numDefStates' set but not used [-Wunused-but-set-variable]
gcc -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c phyloXX.c -o phyloXX.o
gcc -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c reorderBinary.c -o reorderBinary.o
gcc -m32 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O3 -Wall  -std=gnu99 -mtune=core2 -c reorderRobust.c -o reorderRobust.o
g++ -m32 -shared -s -static-libgcc -o phylobase.dll tmp.def GetNCL.o RcppExports.o ancestors.o checkPhylo4.o descendants.o nxsassumptionsblock.o nxsblock.o nxscharactersblock.o nxscxxdiscretematrix.o nxsdatablock.o nxsdistancedatum.o nxsdistancesblock.o nxsemptyblock.o nxsexception.o nxsmultiformat.o nxspublicblocks.o nxsreader.o nxssetreader.o nxsstring.o nxstaxablock.o nxstoken.o nxstreesblock.o nxsunalignedblock.o phyloXX.o reorderBinary.o reorderRobust.o -LR:/base/local215/lib/i386 -LR:/base/local215/lib -LR:/lib/R/R-PATC~1/bin/i386 -lR
installing to R:/lib/local/3.1/phylobase/libs/i386
** R
** data
** inst
** preparing package for lazy loading
Creating a new generic function for 'edges' in package 'phylobase'
Creating a generic function for 'plot' from package 'graphics' in package 'phylobase'
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded

install for x64

* installing to library 'R:/lib/local/3.1'
* installing *source* package 'phylobase' ...
** libs
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c GetNCL.cpp -o GetNCL.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c RcppExports.cpp -o RcppExports.o
gcc -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c ancestors.c -o ancestors.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c checkPhylo4.cpp -o checkPhylo4.o
gcc -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c descendants.c -o descendants.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsassumptionsblock.cpp -o nxsassumptionsblock.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsblock.cpp -o nxsblock.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxscharactersblock.cpp -o nxscharactersblock.o
nxscharactersblock.cpp: In static member function 'static NxsCharactersBlock* NxsCharactersBlock::NewCodonsCharactersBlock(const NxsCharactersBlock*, bool, bool, bool, const std::list*, NxsCharactersBlock**)':
nxscharactersblock.cpp:1306:39: warning: variable 'endNucIt' set but not used [-Wunused-but-set-variable]
nxscharactersblock.cpp: In member function 'virtual void NxsCharactersBlock::HandleFormat(NxsToken&)':
nxscharactersblock.cpp:1975:25: warning: variable 'numDefStates' set but not used [-Wunused-but-set-variable]
nxscharactersblock.cpp: In member function 'virtual void NxsCharactersBlock::HandleStdMatrix(NxsToken&)':
nxscharactersblock.cpp:4102:21: warning: variable 'ftContRowPtr' set but not used [-Wunused-but-set-variable]
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxscxxdiscretematrix.cpp -o nxscxxdiscretematrix.o
nxscxxdiscretematrix.cpp: In function 'unsigned int NxsCompressDiscreteMatrix(const NxsCXXDiscreteMatrix&, std::set&, std::vector*, const NxsUnsignedSet*, const NxsUnsignedSet*)':
nxscxxdiscretematrix.cpp:137:7: warning: variable 'weightsSpecified' set but not used [-Wunused-but-set-variable]
nxscxxdiscretematrix.cpp:138:7: warning: variable 'weightsAsInts' set but not used [-Wunused-but-set-variable]
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsdatablock.cpp -o nxsdatablock.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsdistancedatum.cpp -o nxsdistancedatum.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsdistancesblock.cpp -o nxsdistancesblock.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsemptyblock.cpp -o nxsemptyblock.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsexception.cpp -o nxsexception.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsmultiformat.cpp -o nxsmultiformat.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxspublicblocks.cpp -o nxspublicblocks.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsreader.cpp -o nxsreader.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxssetreader.cpp -o nxssetreader.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsstring.cpp -o nxsstring.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxstaxablock.cpp -o nxstaxablock.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxstoken.cpp -o nxstoken.o
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxstreesblock.cpp -o nxstreesblock.o
nxstreesblock.cpp: In member function 'std::vector > NxsSimpleTree::GetIntPathDistances(bool) const':
nxstreesblock.cpp:357:25: warning: variable 'iRow' set but not used [-Wunused-but-set-variable]
nxstreesblock.cpp:358:25: warning: variable 'jRow' set but not used [-Wunused-but-set-variable]
nxstreesblock.cpp: In member function 'std::vector > NxsSimpleTree::GetDblPathDistances(bool) const':
nxstreesblock.cpp:469:25: warning: variable 'iRow' set but not used [-Wunused-but-set-variable]
nxstreesblock.cpp:470:25: warning: variable 'jRow' set but not used [-Wunused-but-set-variable]
g++ -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"  -I. -DHAVE_INTTYPES_H -DASSERTS_TO_EXCEPTIONS   -O2 -Wall  -mtune=core2 -c nxsunalignedblock.cpp -o nxsunalignedblock.o
nxsunalignedblock.cpp: In member function 'virtual void NxsUnalignedBlock::HandleFormat(NxsToken&)':
nxsunalignedblock.cpp:330:25: warning: variable 'numDefStates' set but not used [-Wunused-but-set-variable]
gcc -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c phyloXX.c -o phyloXX.o
gcc -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c reorderBinary.c -o reorderBinary.o
gcc -m64 -I"R:/lib/R/R-PATC~1/include" -DNDEBUG    -I"R:/lib/local/3.1/Rcpp/include" -I"R:/base/local215/include"     -O2 -Wall  -std=gnu99 -mtune=core2 -c reorderRobust.c -o reorderRobust.o
g++ -m64 -shared -s -static-libgcc -o phylobase.dll tmp.def GetNCL.o RcppExports.o ancestors.o checkPhylo4.o descendants.o nxsassumptionsblock.o nxsblock.o nxscharactersblock.o nxscxxdiscretematrix.o nxsdatablock.o nxsdistancedatum.o nxsdistancesblock.o nxsemptyblock.o nxsexception.o nxsmultiformat.o nxspublicblocks.o nxsreader.o nxssetreader.o nxsstring.o nxstaxablock.o nxstoken.o nxstreesblock.o nxsunalignedblock.o phyloXX.o reorderBinary.o reorderRobust.o -LR:/base/local215/lib/x64 -LR:/base/local215/lib -LR:/lib/R/R-PATC~1/bin/x64 -lR
installing to R:/lib/local/3.1/phylobase/libs/x64
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'phylobase' as phylobase_0.6.9-1.zip
* DONE (phylobase)
Run time: 160.99 seconds.