R Development Page

immunoassay log file (check_x86_64_linux)

Wed May  2 20:19:16 2012: Checking package immunoassay (SVN revision 14) ...
* using log directory '/mnt/building/build_2012-05-02-20-02/RF_PKG_CHECK/PKGS/immunoassay.Rcheck'
* using R version 2.15.0 (2012-03-30)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: ASCII
* checking for file 'immunoassay/DESCRIPTION' ... OK
* checking extension type ... Package
* this is package 'immunoassay' version '0.41'
* checking CRAN incoming feasibility ... NOTE
New submission
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for executable files ... OK
* checking whether package 'immunoassay' can be installed ... OK
* checking installed package size ... OK
* checking package directory ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking for unstated dependencies in R code ... OK
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
batch: no visible binding for '<<-' assignment to 'immunoassay.kits'
batch: no visible binding for global variable 'immunoassay.kits'
batch: no visible binding for '<<-' assignment to 'immunoassay.coefs'
batch: no visible binding for global variable 'immunoassay.coefs'
batch: no visible binding for global variable 'immunoassay.options'
batch: no visible binding for '<<-' assignment to 'immunoassay.options'
batch: no visible binding for '<<-' assignment to
  'immunoassay.environment'
read.multiplex: no visible binding for global variable
  'immunoassay.kits'
sigfit.auto: ... may be used in an incorrect context: sigfit.default(x,
  analyte, model = i2, weights = i3, stvals = NULL, ...)
sigfit.auto: ... may be used in an incorrect context: sigfit.default(x,
  analyte, model = i2, weights = weights, stvals = NULL, ...)
sigfit.auto: no visible binding for '<<-' assignment to
  'immunoassay.coefs'
sigfit.auto: no visible binding for global variable 'immunoassay.coefs'
sigfit.default: no visible binding for global variable
  'immunoassay.coefs'
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of 'data' directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK

NOTE: There were 2 notes.
See
  '/mnt/building/build_2012-05-02-20-02/RF_PKG_CHECK/PKGS/immunoassay.Rcheck/00check.log'
for details.

Run time: 24.72 seconds.